Information for 9-GGCTTCTTGCCC (Motif 9)

C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
Reverse Opposite:
A C T G A C T G A C T G A G T C G C T A C G T A A C T G C T G A C G T A A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.854
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif61.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets106.3 +/- 50.2bp
Average Position of motif in Background91.7 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCTTCTTGCCC-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCTTCTTGCCC
CTGGCAGNCTGCCA
 A C G T A C G T C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTCTTGCCC
TTGGCATGGTGCCA
 A C G T A C G T C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTTCTTGCCC
-GCTTCC-----
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCTTCTTGCCC-
--NNACTTGCCTT
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGCTTCTTGCCC---
------CTGCCCGCA
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCTTCTTGCCC
TAAGGCGTCTTG---
 A C G T A C G T A C G T C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGCTTCTTGCCC---
------ATGCCCACC
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTTCTTGCCC
-NNTTCCCGCCC
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C
A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCTTCTTGCCC-
---TTCCCGCCWG
 C T A G A C T G G T A C G C A T A G C T A G T C G A C T C G A T A C T G A G T C G T A C T A G C A C G T
A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G