Information for 12-GAGCTGGCAGAG (Motif 10)

A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A G T C G T A C C G T A A C T G A G T C A C G T G T A C
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.942
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.5 +/- 54.9bp
Average Position of motif in Background73.9 +/- 42.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGCAGAG
-VGCTGGCA---
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGCAGAG
-ARNTGACA---
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGCTGGCAGAG
--CTTGGCAA--
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGCTGGCAGAG--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGCAGAG
-GGTTGGCAT--
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGCAGAG--
-AGGTGNCAGACAG
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGGCAGAG-
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCTGGCAGAG
TAYAAAAGBWGGCAG--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGGCAGAG-
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGCTGGCAGAG-
-AGGTGHCAGACA
 A C T G C G T A A C T G A G T C A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A