Information for 13-TGGCAGTCTGCC (Motif 11)

C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
Reverse Opposite:
C A T G A T C G A T G C G C T A T A C G T C G A A T G C C G A T A C T G T A G C G T A C G C T A
p-value:1e-13
log p-value:-3.031e+01
Information Content per bp:1.661
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif787.7
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets104.6 +/- 55.5bp
Average Position of motif in Background98.5 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGTCTGCC-
CTGGCAGNCTGCCA
 A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGTCTGCC--
CTTGGCANNNTGCCAA
 A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGGCAGTCTGCC--
TGGCACCATGCCAA
 C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTCTGCC
VGCTGGCA-------
 A C G T A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGCAGTCTGCC
-VBSYGTCTGG-
 C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGTCTGCC-
NAGGTCACNNTGACC
 A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTCTGCC
NTTGGCANN-----
 A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTCTGCC
CTTGGCAA------
 A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTCTGCC
TNNGGGCAG------
 A C G T A C G T A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGTCTGCC--
AGGTCACCCTGACCT
 A C G T C G A T C A T G A T C G T G A C G C T A A T C G A G C T A T G C C G A T T A C G T A G C G T A C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T