Information for 13-CABAAATCAH (Motif 14)

T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
Reverse Opposite:
C A G T C G A T A C T G T C G A A G C T A G C T A G C T T G C A C A G T A T C G
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.457
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif779.2
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets102.2 +/- 56.3bp
Average Position of motif in Background100.3 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CABAAATCAH--
--CAAATCACTG
 T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CABAAATCAH
GCCATAAATCA-
 A C G T A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CABAAATCAH
GGCCATAAATCA-
 A C G T A C G T A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CABAAATCAH----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CABAAATCAH
GGCCATAAATCAC
 A C G T A C G T A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CABAAATCAH-
-HNRAATCAAT
 T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CABAAATCAH-
CCATCAATCAAA
 A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CABAAATCAH
NCYATMAATCAY
 A C G T A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CABAAATCAH
--CCAATCAA
 T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CABAAATCAH
TCATCAATCA-
 A C G T T A G C G T C A A C G T T C G A T C G A T C G A A G C T T G A C G C T A G T C A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T