Information for 11-CAGAGCCG (Motif 18)

T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
Reverse Opposite:
G T A C A T C G A T C G A G T C A C G T A G T C G C A T A C T G
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.623
Number of Target Sequences with motif423.0
Percentage of Target Sequences with motif22.23%
Number of Background Sequences with motif7922.6
Percentage of Background Sequences with motif16.66%
Average Position of motif in Targets99.0 +/- 56.3bp
Average Position of motif in Background100.0 +/- 63.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CAGAGCCG
--CAGCC-
 T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGAGCCG
CGGAGC--
 T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGAGCCG-
RHHCAGAGAGGB
 A C G T A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGAGCCG
GGAACAGCCG
 A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGAGCCG
AGCGCGCC-
 A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAGCCG
WDNCTGGGCA-
 A C G T A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAGAGCCG
GAGSCCGAGC--
 A C G T A C G T A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGAGCCG--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGCCG
CACAGN----
 A C G T A C G T T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGAGCCG----
CACAGCAGGGGG
 T G A C C G T A C T A G T G C A C T A G A T G C T A G C C A T G A C G T A C G T A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G