Information for 24-GTCAGGGTCAGG (Motif 25)

A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C G T C T A G C G T A A G T C
p-value:1e-2
log p-value:-5.798e+00
Information Content per bp:1.978
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.6 +/- 44.7bp
Average Position of motif in Background80.5 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)9.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCAGG
AGGTCAAGGTCA--
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCAGG
BTCAAGGTCA--
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCAGGGTCAGG
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCAGGGTCAGG
-TCAAGGTCAN-
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCAGG
NTCAAGGTCA--
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCAGG--
CGCGCCGGGTCACGTA
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTCAGGGTCAGG
-TCAAGGTCATA
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCAGG
TTCAAGGTCAT-
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTCAGGGTCAGG
-TCAAGGTCAT-
 A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCAGG
AGGTCAAGGTCA--
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T