Information for 4-CTAAAAATAG (Motif 5)

A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G
Reverse Opposite:
A T G C C A G T T G C A G A C T C G A T G C A T G A C T C G A T C T G A T A C G
p-value:1e-32
log p-value:-7.448e+01
Information Content per bp:1.616
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif5.78%
Number of Background Sequences with motif690.1
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets102.3 +/- 54.4bp
Average Position of motif in Background100.6 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CTAAAAATAG
CCAAAAATAG
 A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
DCYAAAAATAGM
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAATAG--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CTAAAAATAG-
GCTAAAAATAGC
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CTAAAAATAG-
KCCAAAAATAGC
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
TCTAAAAATAGA
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
ACTATAAATAGA
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
GCTATAAATAGC
 A C G T A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTAAAAATAG
CCATATATGG
 A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTAAAAATAG
-GAACAATGG
 A T G C G A C T G C T A C T G A C G T A G C T A C T G A A C G T G T C A T A C G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G