Information for 11-TTTTGAAATCCT (Motif 9)

G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
Reverse Opposite:
C G T A C A T G A C T G G T C A G C A T C A G T A G C T G T A C G T C A T G C A G T C A C G T A
p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.614
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif83.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets106.8 +/- 47.4bp
Average Position of motif in Background108.2 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTTGAAATCCT
-TTTGAAACCG-
 G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTGAAATCCT
ATTTGAATT---
 G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGAAATCCT
NATTGTGCAAT---
 A C G T A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGAAATCCT
CCTTTGATGT---
 A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGAAATCCT
ANATTTTTGCAANTN-
 A C G T A C G T A C G T A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTTGAAATCCT
CCTTTGATST---
 A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTTGAAATCCT----
AAGGCGAAATCATCGCA
 A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTTGAAATCCT
CCTTTTATAGNC-
 A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTTGAAATCCT
TTATGCAAT---
 G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGAAATCCT
NNTTTTTCTTATNT-
 A C G T A C G T A C G T G C A T C A G T A C G T C A G T C A T G C T G A G T C A C G T A C A G T T G A C G T A C G C A T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T