Information for 11-GGCTTTGC (Motif 11)

T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C
Reverse Opposite:
T A C G T A G C T G C A C T G A C G T A C T A G A G T C A G T C
p-value:1e-15
log p-value:-3.660e+01
Information Content per bp:1.668
Number of Target Sequences with motif676.0
Percentage of Target Sequences with motif32.50%
Number of Background Sequences with motif11468.2
Percentage of Background Sequences with motif24.50%
Average Position of motif in Targets96.7 +/- 57.0bp
Average Position of motif in Background101.4 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGCTTTGC
NGCTN---
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCTTTGC---
NNCTTTGTTNN
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTGC-
CGGCTGTTCC
 A C G T T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCTTTGC---
TACTTGGCAGA
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCTTTGC---
-CCTTTGATGT
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTGC-----
TGGACTTTGNNCTCN
 A C G T A C G T T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTGC
AAGCTTG--
 A C G T T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTGC------
TGGACTTTGNNCTNTG
 A C G T A C G T T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTTTGC---
-CCTTTGATST
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C A C G T A C G T A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCTTTGC
-GCTCCG-
 T C A G C T A G G A T C C G A T A G C T A C G T A T C G A T G C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T