Information for 17-TAGCAGCAAA (Motif 20)

A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A
Reverse Opposite:
C A G T A G C T A G C T T C A G G A T C C G A T A C T G T A G C A G C T C G T A
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.827
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif148.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets89.5 +/- 39.4bp
Average Position of motif in Background86.1 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAGCAAA----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAGCAAA
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAGCAAA
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAGCAGCAAA
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAAA-
-NACAGGAAAT
 A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGCAGCAAA
TTGCAACATN
 A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAAA--
-GTCAGCANNTN
 A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGCAGCAAA-
-NACAGGAAAT
 A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TAGCAGCAAA-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAAA-
-TGCSGCANTN
 A C G T T C G A A T C G G T A C C G T A C T A G A G T C T C G A T C G A G T C A A C G T
A C G T A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G