Information for 17-GTTGGATT (Motif 23)

A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T
Reverse Opposite:
C G T A C G T A C G A T A G T C A G T C G T C A C G T A G T A C
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.766
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif1707.1
Percentage of Background Sequences with motif3.65%
Average Position of motif in Targets102.7 +/- 57.8bp
Average Position of motif in Background102.9 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTTGGATT---
--GGGATTANN
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTTGGATT--
--GGGATTAA
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTGGATT-
-NGGGATTA
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTTGGATT--
--RGGATTAR
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTTGGATT---
---GGATTAGC
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTTGGATT--
--NGGATTAA
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTGGATT---
-VRGGATTARN
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTTGGATT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTGGATT--
--CGGATTAN
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTGGATT---
-NNGGATTAGN
 A C T G A C G T C A G T T C A G C T A G C G T A C G A T C G A T A C G T A C G T A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C