Information for 2-CVVCAGCTGB (Motif 3)

A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
Reverse Opposite:
T G A C A G T C C G T A A C T G G T A C G C A T A C T G A C G T A G T C T A C G
p-value:1e-62
log p-value:-1.434e+02
Information Content per bp:1.593
Number of Target Sequences with motif615.0
Percentage of Target Sequences with motif29.57%
Number of Background Sequences with motif7059.6
Percentage of Background Sequences with motif15.08%
Average Position of motif in Targets101.2 +/- 51.2bp
Average Position of motif in Background100.1 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:CVVCAGCTGB
CAGCAGCTGN
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CVVCAGCTGB
DRVCAGCTGK
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CVVCAGCTGB
NAHCAGCTGD
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CVVCAGCTGB
NAACAGCTGT
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CVVCAGCTGB
NAMCAGCTGK
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CVVCAGCTGB
NAACAGCTGG
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CVVCAGCTGB-
NNVVCAGCTGBN
 A C G T A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CVVCAGCTGB
NNACAGCTGC
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CVVCAGCTGB-
NNAGCAGCTGCT
 A C G T A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CVVCAGCTGB
-AACAGCTG-
 A T G C T C A G T G C A T G A C C G T A C A T G T G A C G C A T T C A G A C T G
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T