Information for 6-AACTCGCCTT (Motif 12)

C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C T A G A T G C A T C G C G T A A C T G A G C T A G C T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.864
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets112.8 +/- 62.1bp
Average Position of motif in Background92.7 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AACTCGCCTT
NNACTTGCCTT
 A C G T C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACTCGCCTT-
CAAGACGCCTTA
 A C G T C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AACTCGCCTT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACTCGCCTT
NNACTTACCTN
 A C G T C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACTCGCCTT----
--GTGACCTTGRVN
 C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AACTCGCCTT---
---TGACCTTGAV
 C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACTCGCCTT-
-BNTGDCCTTG
 C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

RELB/MA1117.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AACTCGCCTT
GAATTCCCCGG
 A C G T C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACTCGCCTT------
-GCTGACCTTGAACTN
 C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AACTCGCCTT---
---TGACCTTGAN
 C T G A C T G A G T A C A C G T A T G C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A