Information for 10-MTKGCCATAAAC (Motif 13)

G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.0 +/- 49.9bp
Average Position of motif in Background71.2 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:MTKGCCATAAAC
--KGCCATAAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:MTKGCCATAAAC
-AAGCCATAAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:MTKGCCATAAAC--
--NGYCATAAAWCH
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:MTKGCCATAAAC
---GCAATAAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:MTKGCCATAAAC-
---GTCATAAAAN
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:MTKGCCATAAAC
--VGCCATAAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:MTKGCCATAAAC
--RGCAATNAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-MTKGCCATAAAC---
AAAGGTAATAAAATTT
 A C G T G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:MTKGCCATAAAC
--GGCCATTAAC
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:MTKGCCATAAAC-
--GGTAATAAAAA
 G T C A A C G T A C T G A C T G A G T C A G T C G T C A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A