Information for 11-AGAAAACTGAAA (Motif 18)

C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A
Reverse Opposite:
A C G T C G A T A C G T G T A C C G T A A C T G A C G T A C G T A C G T A C G T A G T C A G C T
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets104.2 +/- 47.9bp
Average Position of motif in Background93.9 +/- 71.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGAAAACTGAAA--
--GAAAMTGAAACT
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGAAAACTGAAA--
--GAAAGTGAAAGT
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGAAAACTGAAA--
--GAAACTGAAACT
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AGAAAACTGAAA--
--GAAASYGAAASY
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

SIX1/MA1118.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGAAAACTGAAA
-GTAACCTGATA
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A
A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGAAAACTGAAA----
-GGAAANTGAAACTNA
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGAAAACTGAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

SIX2/MA1119.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGAAAACTGAAA-
AACTGAAACCTGATAC
 A C G T A C G T A C G T C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGAAAACTGAAA--
--GRAASTGAAAST
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGAAAACTGAAA-
-GWAAYHTGABMC
 C T G A C T A G C G T A C G T A C G T A C G T A G T A C A C G T A C T G C G T A C G T A G T C A A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C