Information for 5-GCCGGCAA (Motif 20)

A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A
Reverse Opposite:
A C G T G A C T A T C G G T A C A T G C C T A G A T C G T A G C
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.789
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif11.87%
Number of Background Sequences with motif2363.4
Percentage of Background Sequences with motif4.82%
Average Position of motif in Targets101.1 +/- 58.5bp
Average Position of motif in Background99.2 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCAA
VGCTGGCA-
 A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCGGCAA
CWGGCGGGAA
 A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCGGCAA-
GGCGGGAAAH
 A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGGCAA
CTTCCNGGAA
 A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCGGCAA
CTGCCCGCA-
 A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGGCAA--
RCCGGAARYN
 A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T A C G T
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCGGCAA-
CTTCTGGGAAA
 A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCGGCAA-
BTKGGCGGGAAA
 A C G T A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGCAA--
TGGCGGGAAAHB
 A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCCGGCAA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C T A C G C A T G T A G C C T G A C G T A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G