Information for 17-GATTTKCCAA (Motif 27)

A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
Reverse Opposite:
A G C T A G C T C T A G A C T G G T C A C G T A C G T A C G T A A C G T A T G C
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.818
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif255.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets100.1 +/- 52.1bp
Average Position of motif in Background104.6 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GATTTKCCAA
--TTTTCCA-
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATTTKCCAA-
-ATTTTCCATT
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GATTTKCCAA
CNGTGATTTN----
 A C G T A C G T A C G T A C G T A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GATTTKCCAA-
-ATTTTCCATT
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATTTKCCAA-
-ATTTTCCATT
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATTTKCCAA-
-ATTTTCCATT
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATTTKCCAA
GATTTGCATA
 A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATTTKCCAA
GGATTAGC---
 A C G T A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GATTTKCCAA-
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATTTKCCAA
GGGAATTTCC--
 A C G T A C G T A T C G C G T A A C G T A C G T C G A T A C G T A G T C A G T C C T G A C T G A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T