Information for 24-GACAGGACAG (Motif 33)

A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A G C T A G T C G T A C A C G T A C T G A C G T A G T C
p-value:1e-2
log p-value:-5.304e+00
Information Content per bp:1.948
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif390.6
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets80.5 +/- 51.7bp
Average Position of motif in Background103.8 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-2.1
Multiplicity (# of sites on avg that occur together)2.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAG
TTGACAGC----
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAG
TTGACAGG----
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACAGGACAG
-TRAGGTCA-
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGGACAG
TTGACAG-----
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACAGGACAG
CACAGN----
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACAGGACAG
NACAGGAAAT
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGGACAG
NACAGGAAAT
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACAGGACAG
CAAAGGTCAG
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACAGGACAG
ANGNAAAGGTCA-
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GACAGGACAG
---AGGTCA-
 A C T G C G T A A G T C C G T A A C T G A C T G C T G A A G T C C G T A A C T G
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T