Information for 4-TAGGAAAGAAAC (Motif 6)

G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C
Reverse Opposite:
T C A G G C A T A C G T A C G T A G T C G C A T A C G T A C G T A G T C A G T C A G C T C G T A
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.745
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif322.0
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets102.9 +/- 53.6bp
Average Position of motif in Background98.3 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAGGAAAGAAAC--
GAGAACCGAAACTG
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGGAAAGAAAC-
-AGAAACGAAAGT
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGGAAAGAAAC
-GGYAATGAAA-
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGGAAAGAAAC
CGGAAGTGAAAC
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAGGAAAGAAAC-
-GAAAMTGAAACT
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAGGAAAGAAAC--
----ACTGAAACCA
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGGAAAGAAAC
HDGYAATGAAAN
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGGAAAGAAAC-
-GGAAGTGAAAST
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGGAAAGAAAC----
-CGTATCGAAACCAAA
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGGAAAGAAAC---
CAAAATCGAAACTAA
 G C A T C T G A A C T G T C A G T C G A T G C A C G T A T C A G C G T A T G C A C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A