Information for 1-CCACTAGAGGGC (Motif 1)

A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C
Reverse Opposite:
C T A G T A G C A G T C G T A C A C G T A G T C C G A T C T G A A C T G C G A T C T A G C T A G
p-value:1e-22
log p-value:-5.193e+01
Information Content per bp:1.781
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif5.58%
Number of Background Sequences with motif112.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets113.8 +/- 43.5bp
Average Position of motif in Background90.6 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGAGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGAGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGAGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCACTAGAGGGC---
-CACCAGGGGGCACC
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCACTAGAGGGC
--AACAGATGGC
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCACTAGAGGGC---
---CAAGATGGCGGC
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCACTAGAGGGC---
---CAAGATGGCGGC
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCACTAGAGGGC--
TCACCTCTGGGCAG
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCACTAGAGGGC--
-GGACAGATGGCAG
 A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C A C G T A C G T
A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGAGGGC
NSCACTYVAV---
 A C G T A G T C A G T C G C T A G T A C G A C T C G T A A C T G T G C A A C T G A C T G A T C G A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T