Information for 15-CAGAGGCCTCTG (Motif 18)

A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
Reverse Opposite:
G A T C G C T A T A C G C G T A A C T G A T C G G T A C T A G C A G C T T G A C G A C T A T C G
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.717
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif466.1
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets110.0 +/- 64.3bp
Average Position of motif in Background97.6 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAGAGGCCTCTG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGAGGCCTCTG
-CNAGGCCT---
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGAGGCCTCTG
-CTAGGCCT---
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGAGGCCTCTG-
---KGGCCYCWTD
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G A C G T
A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAGGCCTCTG-
-AGGVNCCTTTGT
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGAGGCCTCTG
--CTGACCTTTG
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGAGGCCTCTG-----
CCNNACCATCTGGCCTN
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAGGCCTCTG------
---TGGACTTTGNNCTCN
 A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CAGAGGCCTCTG
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

CTCFL/MA1102.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGAGGCCTCTG
CACCAGGGGGCACC-
 A C G T A C G T A C G T A T G C C T G A A C T G T C G A A T C G C A T G A T G C G T A C C G A T A T G C C G A T C A T G
T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C A C G T