Information for 11-TGGGAAATTT (Motif 19)

A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
Reverse Opposite:
C G T A G T C A G C T A C A G T A G C T A G C T A G T C G T A C G T A C G T C A
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.697
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif14.47%
Number of Background Sequences with motif2891.7
Percentage of Background Sequences with motif5.97%
Average Position of motif in Targets97.9 +/- 54.9bp
Average Position of motif in Background100.3 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATTT
CSTGGGAAAD--
 A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGGGAAATTT
CCTGGGAAAG--
 A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATTT
NATGGAAAAN--
 A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAAATTT
RGSMTBCTGGGAAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATTT
AATGGAAAAT--
 A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAAATTT
NNGGGGAATNC
 A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGGAAATTT--
--GGGAATTTCC
 A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T A C G T A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGGAAATTT--
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAAATTT
NNTGGAAANN-
 A C G T A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

PRDM1/MA0508.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGGAAATTT-
-GTGAAAGTGA
 A C G T C A T G C A T G C T A G T C G A T C G A G T C A C G A T C A G T C G A T A C G T
A C G T C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A