Information for 2-GCTGGCCAAA (Motif 2)

C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
Reverse Opposite:
G A C T A G C T A G C T C T A G A T C G G T A C G T A C C G T A A C T G G A T C
p-value:1e-14
log p-value:-3.435e+01
Information Content per bp:1.682
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif26.65%
Number of Background Sequences with motif5762.0
Percentage of Background Sequences with motif11.90%
Average Position of motif in Targets95.9 +/- 56.4bp
Average Position of motif in Background100.6 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGCCAAA
CYWSTGGTCARA
 A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCTGGCCAAA
WDNCTGGGCA--
 A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTGGCCAAA
GCTGTG----
 C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCCAAA
NGCTN------
 A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGCCAAA
NAACAGCTGG-----
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGGCCAAA
TGCTGACTCA-
 A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGCCAAA
NAHCAGCTGD-----
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTGGCCAAA
TACTTGGCAGA
 A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGCCAAA-
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGCCAAA
CAGCAGCTGN-----
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A C T G A C T G T A G C G A T C T C G A T C G A C T G A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T