Information for 18-GVACTATCAC (Motif 28)

A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G G T C A A C G T C G T A A T C G A G C T A T G C A G T C
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.817
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.7 +/- 37.5bp
Average Position of motif in Background125.9 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GVACTATCAC----
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GVACTATCAC--
--ATTAACACCT
 A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GVACTATCAC
--CCAATCAA
 A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GVACTATCAC----
--ACTTTCACTTTC
 A C T G T A C G C T G A A T G C C G A T C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C