Information for 3-CTATTTTTAG (Motif 3)

A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G
Reverse Opposite:
T G A C G A C T G T C A C G T A T C G A C T G A G C T A G C A T C G T A C T A G
p-value:1e-14
log p-value:-3.383e+01
Information Content per bp:1.712
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif616.6
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets105.2 +/- 53.6bp
Average Position of motif in Background99.2 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
TCTATTTTTAGA
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
TCTATTTATAGN
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAG-
GCTATTTTTAGC
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
KCTATTTTTRGH
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
GCTATTTATAGC
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTTTAG---
TTCTATTTTTAGNNN
 A C G T A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTATTTTTAG
CTATTTTTGG
 A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAG-
GCTATTTTTGGM
 A C G T A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTATTTTTAG
CCATATATGG
 A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTATTTTTAG
--ATTGTTA-
 A G T C G C A T C G T A C G A T G A C T A G C T G C A T A C G T C T G A A C T G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T