Information for 12-TCTCTCGC (Motif 30)

A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C
Reverse Opposite:
A T C G T G A C A T C G C T G A T C A G G T C A A T C G C T G A
p-value:1e-4
log p-value:-1.018e+01
Information Content per bp:1.685
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif23.35%
Number of Background Sequences with motif7553.3
Percentage of Background Sequences with motif15.60%
Average Position of motif in Targets92.4 +/- 55.5bp
Average Position of motif in Background97.8 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTCTCGC--------
-CTCTCGCGAGATCTG
 A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCGC----
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCGC----
CTGTCTGTCACCT
 A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTCTCGC------
--TCTCGCGAGAAT
 A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTCTCGC----
TGTCTGDCACCT
 A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTCTCGC
TGTCTAGA
 A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCGC-
NYTTCCCGCC
 A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTCGC----
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCGC--
VDTTTCCCGCCA
 A C G T A C G T A G C T A T G C A C G T A G T C A G C T T A G C A C T G A T G C A C G T A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A