Information for 20-TGGTCTAGAC (Motif 31)

C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.004e+01
Information Content per bp:1.964
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets161.5 +/- 22.0bp
Average Position of motif in Background140.8 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:TGGTCTAGAC-
-TGTCTAGACG
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TGGTCTAGAC-
---TCTAGACA
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCTAGAC--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGTCTAGAC---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGGTCTAGAC--
----CCAGACAG
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGTCTAGAC------
CAAATCCAGACATCACA
 A C G T C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGGTCTAGAC----
----CCAGACRSVB
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGGTCTAGAC--
----BCAGACWA
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGTCTAGAC
AGGCCTAG--
 C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCTAGAC
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G