Information for 4-GAGGGCGGGGCT (Motif 5)

C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C A G T C A G T C G T A C C T A G A G T C A G T C A G T C C A G T A G T C
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.814
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif5.08%
Number of Background Sequences with motif261.4
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets98.9 +/- 57.4bp
Average Position of motif in Background93.0 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGGGCT-
AGGGGGCGGGGCTG
 A C G T C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GAGGGCGGGGCT
-GGGGNGGGGC-
 C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGGGGCT
GGGGGCGGGGC-
 C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGGGCT-
NNVDGGGYGGGGCYN
 A C G T A C G T C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGGGGCT
GGGGGCGGGGCC
 C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GAGGGCGGGGCT
-DGGGYGKGGC-
 C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GAGGGCGGGGCT-
-GGGGCGGGGCCR
 C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T A C G T
A C G T C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGCGGGGCT
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGGGGCT
RGKGGGCGGAGC-
 A C G T C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGGGGCT--
NNAGGGGCGGGGTNNA
 A C G T A C G T C T A G G T C A C T A G A C T G A C T G G A T C C A T G A C T G A C T G A C T G A G T C A G C T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A