Information for 10-ATTAGCAGCT (Motif 12)

C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T
Reverse Opposite:
C G T A A C T G T A G C A C G T T C A G T A G C G A C T G T C A C G T A C G A T
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.818
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif410.8
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets86.7 +/- 44.9bp
Average Position of motif in Background99.0 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATTAGCAGCT
ATTAACACCT
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGCAGCT------
NNNNAGCAGCTGCTGAN
 A C G T C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAGCT-
-TTMACACCTT
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

ASCL1/MA1100.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATTAGCAGCT----
-GCAGCAGCTGGCG
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C C T G A T C A G T A G C C G T A A T C G T A G C A C G T A T C G A T C G A T G C T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ATTAGCAGCT---
---AGCAGCTGCT
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAGCT-
-TTVACACCTH
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T
A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATTAGCAGCT-
---ANCAGCTG
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATTAGCAGCT-----
---AGCAGCTGCTNN
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ATTAGCAGCT-----
---DGCAGCTGCYSS
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATTAGCAGCT--
--BAACAGCTGT
 C G T A C G A T A C G T C T G A A T C G A G T C C G T A A C T G G T A C G C A T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T