Information for 9-WCRGTCYCTAAC (Motif 13)

C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A C T A G C T G A A C T G C G T A A G T C G A C T A C T G C G T A
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.880
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.7 +/- 70.4bp
Average Position of motif in Background113.5 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:WCRGTCYCTAAC-
-AGGTCTCTAACC
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WCRGTCYCTAAC-
-RGGGCACTAACY
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WCRGTCYCTAAC---
NTNNCGTATCCAAGTNN
 A C G T A C G T C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WCRGTCYCTAAC--
-CTGTCTGTCACCT
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---WCRGTCYCTAAC--
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WCRGTCYCTAAC---
GGAGGTCATTAATTAT
 A C G T C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WCRGTCYCTAAC--
--TGTCTGDCACCT
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-WCRGTCYCTAAC
GSCTGTCACTCA-
 A C G T C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WCRGTCYCTAAC
NCTGTCAATCAN
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX2/MA1113.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:WCRGTCYCTAAC
NCTGTCAATCAN
 C G A T A G T C C T A G A C T G A C G T A G T C A G C T A G T C A C G T C G T A C G T A A G T C
A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C