Information for 12-ACTGTAATAG (Motif 15)

G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G
Reverse Opposite:
T G A C G C A T T C G A A C G T C G A T T G C A G T A C C G T A A C T G A C G T
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.830
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif209.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets111.0 +/- 56.2bp
Average Position of motif in Background99.3 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAATAG---
AACACTGCAATTGTTC
 A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTAATAG--
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTAATAG--
AACACTGAAATTGTT
 A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTAATAG--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTAATAG--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTGTAATAG--
TTGAATGAAATTCGA
 A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTGTAATAG-
---NTAATTGN
 G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTGTAATAG-
---NTAATTGG
 G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T
A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTGTAATAG--
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTGTAATAG
-CACTAATT-
 G T C A G T A C A C G T A C T G A C G T G C T A C G T A A G C T C G T A A C T G
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T