Information for 13-ATACTAARGC (Motif 16)

C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T C T G A A T C G C G A T C T G A A G C T
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.734
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif625.9
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets109.0 +/- 56.7bp
Average Position of motif in Background101.2 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATACTAARGC
AAAACAAAGG-
 A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATACTAARGC
AAGCACTTAA--
 A C G T A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATACTAARGC
HDGYAATGAAAN
 A C G T A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATACTAARGC
AGCCACTCAAG-
 A C G T A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATACTAARGC--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATACTAARGC
RSCACTYRAG-
 A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATACTAARGC
AAAACAAAGAA
 A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATACTAARGC-
NGYCATAAAWCH
 A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ATACTAARGC
MRSCACTYAA--
 A C G T A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATACTAARGC
GGTAATAAAAA
 A C G T C T G A A G C T C G T A A T G C A G C T G T C A C G T A C T A G C T A G G T A C
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A