Information for 10-CCAGGGAGCTCG (Motif 17)

A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.2 +/- 33.0bp
Average Position of motif in Background147.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGAGCTCG
CACCAGGGGGCACC
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCAGGGAGCTCG
---CGGAGC---
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCAGGGAGCTCG-
---GGGAGGACNG
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGAGCTCG
RHHCAGAGAGGB--
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAGGGAGCTCG-
-CAGTGTGGTCGC
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCAGGGAGCTCG
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGGAGCTCG
TCCCNNGGGACN---
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGGAGCTCG
TCCCCTGGGGAC---
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGGGAGCTCG
DBTCCCHWGGGAVTN--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G
C G T A A C G T A G C T A G T C G A T C G A T C G A C T C G T A C T A G C T A G T C A G T C G A T G A C G A C T C G A T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGGGAGCTCG--
ATAAGGGCGCGCGAT
 A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C T G A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T