Information for 18-GACAGAGATA (Motif 20)

C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
Reverse Opposite:
C G A T G T C A C G A T A T G C A G C T A T G C A C G T A C T G C G A T G A T C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.833
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif758.5
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets99.9 +/- 55.5bp
Average Position of motif in Background97.0 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAGAGATA-
RHHCAGAGAGGB
 A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACAGAGATA-------
GACAGAGATATCAGTGT
 C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGATA
TTGACAG-----
 A C G T A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACAGAGATA---
NNNACCGAGAGTNNN
 A C G T A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGATA
TTGACAGC----
 A C G T A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGATA
TTGACAGG----
 A C G T A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGATA
AAAACAAAGAA-
 A C G T A C G T C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACAGAGATA--
GAAAGTGAAAGT
 C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACAGAGATA
CACAGN----
 C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GACAGAGATA----
---ANAGATAAGAA
 C T A G G C T A A G T C C G T A A T C G C T G A T A C G G C T A C A G T G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A