Information for 9-AATGTGGT (Motif 21)

C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T
Reverse Opposite:
C G T A G T A C A T G C C G T A A G T C C G T A A G C T C G A T
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.825
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.15%
Number of Background Sequences with motif1963.4
Percentage of Background Sequences with motif4.06%
Average Position of motif in Targets88.2 +/- 52.8bp
Average Position of motif in Background97.9 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AATGTGGT---
NNHTGTGGTTWN
 A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATGTGGT---
-CTGTGGTTTN
 C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AATGTGGT--
NNTGTGGTTT
 C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AATGTGGT--
GCTGTGGTTT
 C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AATGTGGT--
GTCTGTGGTTT
 A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATGTGGT---
CAGTGTGGTCGC
 A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATGTGGT
TTAAGTGGT
 A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATGTGGT--
TTTGCGGTTT
 C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T A C G T A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

TEAD2/MA1121.1/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AATGTGGT
GNNTGGAATGTGN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AATGTGGT
ACAGGATGTGGT
 A C G T A C G T A C G T A C G T C G T A C T G A C G A T A C T G C G A T A T C G A C T G A C G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T