Information for 15-ATTSGTRTRYAT (Motif 24)

C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
Reverse Opposite:
C G T A A C G T C T G A A G T C C G T A A G T C C G T A A G T C A T G C C G T A C G T A A C G T
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets126.0 +/- 48.1bp
Average Position of motif in Background96.3 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTSGTRTRYAT--
YATGCATATRCATRT
 A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATTSGTRTRYAT-----
ANNNGGATATATCCNNN
 C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTSGTRTRYAT
TTATTAGTACATAN
 A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTSGTRTRYAT
CTGATTGGTCNATTT
 A C G T A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATTSGTRTRYAT
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTSGTRTRYAT
TAATTGTTCTAAAC
 A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------ATTSGTRTRYAT
ANCGCTAATTGGTCTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATTSGTRTRYAT
GTATCTATTGTTCTTTA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTSGTRTRYAT---
NNNTTTGTTTACATTTN
 A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATTSGTRTRYAT
CTCATGAATATTCAT
 A C G T A C G T A C G T C G T A A C G T A C G T A T C G A C T G A C G T C T A G A C G T C T A G A G C T C G T A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T