Information for 20-CAAAGGTTTT (Motif 26)

A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A G T C A T G C A C G T A C G T A C G T A C T G
p-value:1e-6
log p-value:-1.463e+01
Information Content per bp:1.943
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets81.4 +/- 36.7bp
Average Position of motif in Background102.1 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGTTTT
AACAAAGG----
 A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGTTTT
RACAAWGG----
 A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTTTT
AAAACAAAGG----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTTTT
ASATCAAAGG----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGTTTT
ACWTCAAAGG----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGTTTT
ACATCAAAGG----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTTTT---
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGTTTT
AAAACAAAGAA---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGTTTT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTTTT
GGAACAAAGR----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A T C G A C T G A C G T C G A T A C G T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T