Information for 18-TGTGTGTATTGG (Motif 27)

A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.055e+01
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.8 +/- 51.6bp
Average Position of motif in Background62.7 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGTGTGTATTGG-
--TGTGGATTNNN
 A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGTGTGTATTGG
NNTGTGGATTSS
 A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGTATTGG--
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTGTGTATTGG
--TTTTTATTGG
 A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTGTGTATTGG
--NTTTTATTGG
 A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTGTATTGG
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTATTGG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTATTGG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGTATTGG---
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTATTGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T G T C A A C G T A C G T C T A G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T