Information for 22-CTGTGCTGTCTG (Motif 30)

A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C C G T A A G T C C G T A A C T G
p-value:1e-2
log p-value:-4.892e+00
Information Content per bp:1.974
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets114.6 +/- 56.4bp
Average Position of motif in Background95.8 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGTGCTGTCTG------
-NNTNNTGTCTGGNNTNG
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CTGTGCTGTCTG-
-----CTGTCTGG
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGTGCTGTCTG-
---VBSYGTCTGG
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGTGCTGTCTG-
---TGCTGACTCA
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTGTGCTGTCTG-
-----TWGTCTGV
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGTGCTGTCTG
GCTGTG-------
 A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGTGCTGTCTG
GCTGTGGTTT---
 A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGTGCTGTCTG---
---VCCTCTCTGDDY
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGTGCTGTCTG
CTGTGGTTTN--
 A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGTGCTGTCTG
GTCTGTGGTTT---
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T G T A C A C G T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T