Information for 1-GCCACCTAGTGG (Motif 1)

A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A G C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C
p-value:1e-97
log p-value:-2.253e+02
Information Content per bp:1.912
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif12.59%
Number of Background Sequences with motif444.3
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets98.4 +/- 47.7bp
Average Position of motif in Background102.4 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.90
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCACCTAGTGG
NGTGCCCCCTGGNG-
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
T C A G T A C G A G C T C A T G T G A C A T G C T G A C A G T C A T G C A C G T T C A G A T C G A G C T A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTAGTGG
GCCATCTGTT--
 A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTAGTGG-
NGGCCTCCCAGGGAG
 A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GCCACCTAGTGG--
--------GTGGAT
 A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCACCTAGTGG---
GGCACCCAGGGGTGC
 A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTAGTGG
NNNCCATCTGTNN-
 A C G T A C G T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCACCTAGTGG
GCCAGCTGBTNB
 A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C