Information for 10-CTATGAAATATC (Motif 12)

A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
Reverse Opposite:
A T C G C G T A A C G T C T G A A C G T A C G T A C G T A G T C C G T A C G A T C G T A C T A G
p-value:1e-12
log p-value:-2.970e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets147.3 +/- 53.8bp
Average Position of motif in Background170.8 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
AAATAAGAAAAAAC
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATGAAATATC
CYHATAAAAN---
 A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T A C G T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
GGCMATGAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTATGAAATATC
KGCCATAAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTATGAAATATC
CCTTTGATGT---
 A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
VGCCATAAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A A C G T A C G T A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
NCYAATAAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTATGAAATATC
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
GGYAATGAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTATGAAATATC
NGCAATTAAA----
 A C G T A C G T A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T