Information for 12-TCCCGTCTGG (Motif 14)

A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G
Reverse Opposite:
T G A C A G T C G C T A A C T G C G T A G A T C T C A G A C T G C T A G T G C A
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.840
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif169.7
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets102.7 +/- 50.1bp
Average Position of motif in Background108.6 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:TCCCGTCTGG
--CTGTCTGG
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCCCGTCTGG
VBSYGTCTGG
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGTCTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TCCCGTCTGG---
---GGTCTGGCAT
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCCCGTCTGG-
---TGTCTAGA
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGTCTGG--
NNNCCATCTGTNN
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

TWIST1/MA1123.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCGTCTGG---
NNACATCTGGNNN
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
C T G A T G C A T G C A T G A C C T G A A C G T T A G C G C A T C A T G A C T G G C T A C G T A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGTCTGG
TTCCCGCCWG-
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCCGTCTGG-
-GCCATCTGTT
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCCGTCTGG-
-ACCATCTGTT
 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T