Information for 1-ATTTGGCA (Motif 2)

C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A
Reverse Opposite:
C G A T A C T G A G T C A G T C C G T A C T G A T C G A G C A T
p-value:1e-31
log p-value:-7.283e+01
Information Content per bp:1.703
Number of Target Sequences with motif361.0
Percentage of Target Sequences with motif35.50%
Number of Background Sequences with motif9357.9
Percentage of Background Sequences with motif19.61%
Average Position of motif in Targets99.2 +/- 54.1bp
Average Position of motif in Background98.8 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCA--
-NTTGGCANN
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCA--
NNTTGGCANN
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-ATTTGGCA--
TACTTGGCAGA
 A C G T C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCA-
-CTTGGCAA
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCA-
GGTTGGCAT
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATTTGGCA-
GGTCTGGCAT
 A C G T C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------ATTTGGCA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCA
VGCTGGCA
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCA-
NGTGGGCAT
 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T