Information for 17-CATTTCTAGA (Motif 23)

A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A
Reverse Opposite:
C G A T A G T C G A C T C G T A T C A G T G C A C T G A C T G A C G A T T A C G
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.496
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif1016.1
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets97.2 +/- 59.7bp
Average Position of motif in Background100.6 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATTTCTAGA-----
-TTTCCTAGAAAGCA
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATTTCTAGA----
NNNATTCCTCGAAAGN
 A C G T A C G T A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATTTCTAGA--
--TGTCTAGACG
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CATTTCTAGA------
-TTTCCTGGAAAGNNN
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATTTCTAGA--
----TCTAGACA
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTTCTAGA
TCTATTTTTAGA
 A C G T A C G T A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTTCTAGA
TCTATTTATAGN
 A C G T A C G T A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTTCTAGA--
-TTTCCTGGAAA
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATTTCTAGA
KCTATTTTTRGH
 A C G T A C G T A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATTTCTAGA------
---TTCTAGAACGTTC
 A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C