Information for 19-CCGCAGGATG (Motif 25)

A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A C G A T A G T C A T G C G C A T A T C G T G A C A C T G A T C G
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.836
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif211.4
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets87.9 +/- 50.6bp
Average Position of motif in Background93.9 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAGGATG--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGCAGGATG-
-ANCAGGATGT
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGCAGGATG
CACAGCAGGGGG
 A C G T A C G T A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGCAGGATG---
-NDCAGGAARTNN
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T A C G T A C G T
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCGCAGGATG--
--ACAGGAAGTG
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCGCAGGATG----
--ACAGGATGTGGT
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGCAGGATG-
-AACAGGAAGT
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAGGATG
DCTCAGCAGG---
 A C G T A C G T A C G T A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGCAGGATG--
--ACAGGAAGTG
 A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGCAGGATG
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A