Information for 20-GTCCAACTGA (Motif 27)

C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C T G A G C T A C G T C T A G A C T G C G T A G T A C
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.827
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif221.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets89.3 +/- 57.3bp
Average Position of motif in Background97.9 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GTCCAACTGA-
-ACCAACTGTC
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTCCAACTGA----
CGACCAACTGCCGTG
 A C G T C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTCCAACTGA-----
CGACCAACTGCCATGC
 A C G T C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTCCAACTGA--
--CCAACTGCCA
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTCCAACTGA--
--NHAACBGYYV
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTCCAACTGA--
--HCAGCTGDTN
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAACTGA--
NNNCCATCTGTNN
 A C G T C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTCCAACTGA--
--VCAGCTGBNN
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCCAACTGA-
-ACCACCTGTT
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCCAACTGA--
--CCAGCTGTTN
 C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A