Information for 22-TGAAATYGGA (Motif 29)

A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
Reverse Opposite:
C G A T T G A C T G A C C T G A G C T A A C G T A C G T C G A T A T G C T G C A
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.685
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif227.1
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets87.2 +/- 49.4bp
Average Position of motif in Background105.3 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX1/MA0666.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGG-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T

MSX2/MA0708.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGG-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGAAATYGGA-----
TGWAAYCTGABACCB
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A A C G T A C G T A C G T A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGAAATYGGA---
-GWAAYHTGAKMC
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGG-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGN-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T

DLX6/MA0882.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGN-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGN-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGAAATYGGA
NNTAATTAGA
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGAAATYGGA
-NTAATTGN-
 A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T