Information for 23-GCGAGCCAGC (Motif 30)

A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C C G A T A T C G A C T G A G T C C G A T A T G C C T A G A G T C
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.761
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif227.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets107.7 +/- 58.7bp
Average Position of motif in Background103.3 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGAGCCAGC
TTGCGTGCVA--
 A C G T A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGAGCCAGC-
---TGCCAGCB
 A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C A C G T
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGAGCCAGC
AGCGCGCC---
 A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGAGCCAGC
TGCGTG-----
 A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCGAGCCAGC
ATAAAGGCGCGCGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGCCAGC
NNCGCGTGNN---
 A C G T A C G T A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGAGCCAGC-
--ATGCCAACC
 A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGAGCCAGC-
-TGAGTCAGCA
 A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C A C G T
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGCCAGC--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGAGCCAGC
-CGTGCCAAG
 A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G