Information for 13-SACGTAAC (Motif 31)

A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T C G T A A G T C A C T G C G A T A T C G
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.897
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif149.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets137.9 +/- 43.5bp
Average Position of motif in Background102.6 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-SACGTAAC
TTACGTAA-
 A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T

USF2/MA0526.2/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----SACGTAAC----
NNGCCACGTGACCNNN
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C T G T C A G T C A G G A T C T G A C C T G A A G T C T C A G A G C T A T C G C T G A A G T C G A T C G A T C T A G C T A C G

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-SACGTAAC-
NCACGTGACN
 A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:SACGTAAC
TACGTCAT
 A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----SACGTAAC
CGGTGACGTCAC
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--SACGTAAC
GTCACGTGAC
 A C G T A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--SACGTAAC
BGCACGTA--
 A C G T A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-SACGTAAC---
TCACGTGACCGG
 A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-SACGTAAC-
GCACGTACCC
 A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C A C G T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Crem/MA0609.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-SACGTAAC-
TTACGTCATN
 A C G T A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C A C G T
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A