Information for 1-CCACCAGATGGC (Motif 1)

A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C G T C A A G C T A G T C A G C T C T A G A T C G A C G T A C T G A C T G
p-value:1e-36
log p-value:-8.416e+01
Information Content per bp:1.890
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif95.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets92.2 +/- 46.6bp
Average Position of motif in Background94.1 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGATGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGATGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGATGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCACCAGATGGC
--AACAGATGGC
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

CTCFL/MA1102.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCACCAGATGGC---
-CACCAGGGGGCACC
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCACCAGATGGC--
-GGACAGATGGCAG
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C A C G T A C G T
A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCACCAGATGGC
--AACAGATGGT
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCACCAGATGGC
--AACAKATGGY
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCACCAGATGGC
--DMCAGATGKS
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
A C G T A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCACCAGATGGC
VNAVCAGCTGGC
 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C